miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86096743|gb|BB907952.1|BB907952 CATAAACGGCTTTAGTCTTTCTTCTTTGTCACATGCCAAAACTTCTATCAAGAAAACTACATTGAGACCCTTTGCATCAC
TTAACTCTTCTTCTTCCTCTTCATCTTCTAATTTCCCTTCTCTTATTCAAGACAAACCTGTTTTTGCTTCCTCTTCTCCT
TTCATCACTCCAATTTTGAGAGAAGAAATGGGAAAGGGTTATGAAGAAGCAATTCAAGAACTCGAGAAATTGTTGAGGGA
GAAGGCCGACTTGAAAGCCACAGCAGCTGAAAAGGTTGAACAAATAACAGCTCAACTTGGATCAGTTACAGCTCAAGCTG
CAACACCATCATCATCTGATGGTATTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGTTTCATTCACTTCAAGAAA
GAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAAGCCCCCCGTATATGGTGTTTGCATGCTC
AGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAAGCTTTTGTGGTCAGAAATGTTGCTAACTTGG
TTCCACCATATGACCAG




Most similar to sp|P17067|CAHC_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
           sativum PE=1 SV=1
          Length = 328

 Score =  287 bits (734), Expect = 4e-77
 Identities = 152/194 (78%), Positives = 160/194 (82%), Gaps = 2/194 (1%)
 Frame = +2

Query: 2   INGFSLSSLSHAKTSIKKTTLRXXXXXXXXXXXXXXXXXXX--IQDKPVFASSSPFITPI 175
           INGFSLSSLS AKTS K+TTLR                     IQDKPVFASSSP ITP+
Sbjct: 6   INGFSLSSLSPAKTSTKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPV 65

Query: 176 LREEMGKGYEEAIQELEKLLREKADLKATAAEKVEQITAQLGSVTAQAATPSSSDGIPTS 355
           LREEMGKGY+EAI+EL+KLLREK +LKATAAEKVEQITAQLG       T SSSDGIP S
Sbjct: 66  LREEMGKGYDEAIEELQKLLREKTELKATAAEKVEQITAQLG-------TTSSSDGIPKS 118

Query: 356 EASERIKTGFIHFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAF 535
           EASERIKTGF+HFKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 119 EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 178

Query: 536 VVRNVANLVPPYDQ 577
           VVRNVANLVPPYDQ
Sbjct: 179 VVRNVANLVPPYDQ 192